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Klaus 280 discard pose data when convex hull is larger than expected mouse size #92

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Klaus 280 discard pose data when convex hull is larger than expected mouse size #92

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Note: This PR is to a different dev branch, because it depends on a func I wrote there.

Changes:

  • Adds new CLI util for unmarking mice that appear too big.
  • De-duplicates some leftover migrated functions from Alex's refactor (Repository reorganization #72)
    • Removes utils.pose completely. These functions have been migrated elsewhere.
    • Moves location of downgrade_pose_file to resolve a circular import.

bergsalex and others added 15 commits September 29, 2025 11:33
@bergsalex
Fix single-mouse-corrected-corners workflow, variable typo for PREPAR…
2afd66d 
…E_DATA reference
@bergsalex
Merge pull request #86 from KumarLabJax/bugfix/incorrect-process-refe…
1acf082 
…rence

Fix single-mouse-corrected-corners workflow
@bergsalex
Switch from readLines to splitText in single-mouse-corrected-corners
8f3f23e
@bergsalex
Update singularity image locations for sumner2
55b68fe
@bergsalex
Merge pull request #88 from KumarLabJax/bugfix/unknown-method-invocat…
c8e1126 
…ion-getfilesystem

Switch from readLines to splitText in single-mouse-corrected-corners
@SkepticRaven
Add definition for rclone container
6ece6a1
@bergsalex
Merge pull request #87 from KumarLabJax/update-singularity-image-loca…
7f8010b 
…tions-sumner2

Update singularity image locations for sumner2
@SkepticRaven
Adding cli interface to filter unassign identity when keypoints are t…
4a01bac 
…oo far apart.
@SkepticRaven
Removing circular import
efda379
@SkepticRaven
Properly overwriting field
7562c3e
@SkepticRaven
Patching feature workflow update of var names
6571f2b
@SkepticRaven
uv env config changes for ubuntu dev
66329ca
@SkepticRaven
Merge branch 'main' into KLAUS-280-discard-pose-data-when-convex-hull…
8b520d1 
…-is-larger-than-expected-mouse-size
@SkepticRaven
Also need to modify id_mask field
d0fc1e7
@SkepticRaven
Moving gpu library extras group
9ebb131
@SkepticRaven SkepticRaven self-assigned this Oct 3, 2025
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@SkepticRaven @bergsalex